The moment that warm, cheesy goodness starts emanating from the oven, I know something special is about to grace my kitchen. These Cottage Cheese Muffins are a delightful surprise, bursting with the unexpected flavors of zucchini and a melty Mexican cheese blend. As I took my first bite, I was amazed not only by their fluffy texture but also how effortlessly they fit into any meal—whether it’s breakfast on the go, a savory snack, or a comforting side for dinner.
I stumbled upon this gem while looking for ways to incorporate more protein into our family’s diet without sacrificing flavor. And trust me, these muffins deliver on all fronts! Bursting with freshness and made from wholesome ingredients like einkorn and blanched almond flour, they promise a nourishing bite that both kids and adults love. So, if you’re ready to say goodbye to bland baked goods and hello to a dish that’s incredibly easy and impressively delicious, let’s dive into the recipe that has become a staple in my home!
Why are Cottage Cheese Muffins a must-try?
Fluffy Texture: The secret to their irresistible fluffiness lies in the cottage cheese, making each bite a delight.
Zucchini Goodness: Packed with shredded zucchini, they sneak in extra nutrients without compromising flavor.
Quick and Easy: In just about 30 minutes, you’ll have these scrumptious muffins ready, perfect for busy mornings.
Versatile Enjoyment: Enjoy them solo, paired with soup, or slathered with your favorite spreads!
Family-Friendly: Kids love the cheesy taste, while adults appreciate the wholesome ingredients.
These muffins are a great way to embrace homemade charm while nourishing your family. For more unique cooking ideas, check out my guide on creative muffin recipes.
Cottage Cheese Muffin Ingredients
• Here’s everything you need to whip up these delightful muffins!
For the Muffin Batter
• 6 oz Zucchini – Grated zucchini adds moisture and sneaks in veggies for a nutrient boost.
• 3/4 cup Cottage cheese – This ingredient is key for achieving a fluffy texture and adding protein.
• 2 large Eggs – Eggs bind the ingredients and add richness to the muffins.
• 1 cup Einkorn flour – A nutritious alternative to regular flour, offering a nutty taste.
• 3/4 cup Blanched Almond Flour – Adds a delicate texture while being gluten-free soft.
• 1 tsp Baking powder – Essential for making the muffins rise perfectly.
• 1/2 tsp Sea salt – Enhances the flavors and balances the sweetness.
• 3/4 cup Mexican blend cheese (shredded) – This melty cheese brings in a deliciously cheesy flavor that makes these Cottage Cheese Muffins shine.
These ingredients will come together to create a mouthwatering sensation that your family will love! Enjoy the cooking adventure!
How to Make Cottage Cheese Muffins
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Preheat the oven to 350°F (176°C). Line 10 cups of a muffin tin with parchment paper liners; this will ensure easy removal of your muffins later on.
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Shred the zucchini using a food processor with a grating attachment. Transfer the shredded zucchini to a large bowl, and set aside to keep the moisture intact.
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Blend the cottage cheese and eggs in the food processor using the knife blade attachment. Whiz until the mixture is smooth and creamy, about 30 seconds.
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Combine the einkorn flour, almond flour, baking powder, and sea salt into the food processor. Blend again until smooth, scraping down the sides as needed to ensure an even mix.
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Fold the batter into the bowl with the zucchini. Add the shredded Mexican blend cheese and gently mix until everything is well incorporated and uniform.
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Scoop the batter into the lined muffin cups using a large cookie scoop. Divide the mixture evenly among the cups, filling them almost to the top for that lovely dome shape!
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Bake the cottage cheese muffins for 25-30 minutes. They’re ready when the tops are golden brown and a toothpick inserted comes out clean.
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Cool the muffins in the pan for 5-10 minutes before carefully removing them. This short cooling time helps to set their structure!
Optional: Serve warm with a sprinkle of extra cheese on top for added indulgence!
Exact quantities are listed in the recipe card below.
What to Serve with Cottage Cheese Muffins?
These delightful muffins can fit beautifully into any meal, offering a charming balance of flavors and textures.
- Fresh Green Salad: A crisp, refreshing salad complements the savory muffins, adding a light, vibrant touch to your meal.
- Creamy Avocado Spread: A silky avocado topping enhances each bite, bringing richness that harmonizes with the fluffy muffins.
- Hearty Tomato Soup: Pairing these muffins with a warm bowl of tomato soup makes for a comforting combo perfect for chilly evenings.
- Savory Herb Omelet: For a delightful breakfast, a fluffy herb omelet alongside these muffins creates a delicious and protein-packed start to your day.
- Zesty Salsa: A side of zesty salsa can add a vibrant kick and fresh element to enjoy with the cheesy goodness of the muffins.
- Roasted Veggies: Earthy roasted vegetables will bring a nice contrast, creating a satisfying meal filled with wholesome goodness.
- Herbal Tea or Coffee: Enjoying these muffins with a warm cup of herbal tea or coffee creates an inviting atmosphere for your breakfast or brunch.
Each of these accompaniments can elevate your cottage cheese muffins from humble to incredible!
Make Ahead Options
These Cottage Cheese Muffins are perfect for meal prep enthusiasts! You can shred the zucchini and mix the dry ingredients (einkorn flour, almond flour, baking powder, and sea salt) up to 24 hours in advance. To maintain freshness, store the zucchini in an airtight container in the refrigerator and the dry mix in a cool, dry place. When you’re ready to bake, simply combine the prepped zucchini and dry ingredients with the cottage cheese, eggs, and shredded cheese. Scoop the batter into the muffin cups and bake as directed. This way, you’ll have delicious, homemade muffins with minimal effort, making your busy mornings a breeze!
Cottage Cheese Muffin Variations
Feel free to get creative and make these muffins your own—there are so many ways to enjoy them!
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Herbed Variation:
Add a tablespoon of dried herbs like oregano or thyme to the batter for a fragrant twist. -
Spicy Kick:
Mix in 1/2 tsp of red pepper flakes or chopped jalapeños for a delightful heat in every bite. -
Cheese Swap:
Experiment with different cheese blends—try sharp cheddar or even a spicy pepper jack for a zesty flavor. -
Nutty Crunch:
Fold in 1/2 cup of chopped walnuts or pecans for an added crunch and nutty aroma. -
Sweet Twist:
For a touch of sweetness, add a tablespoon of honey or maple syrup to the batter to balance the flavors. -
Vegetable Mix:
Incorporate shredded carrots or spinach alongside the zucchini for extra nutrients and vibrant color. -
Gluten-Free Option:
Substitute both flours with a gluten-free all-purpose blend to accommodate those with gluten sensitivities. -
Savory Add-Ins:
Toss in some cooked bacon bits or sautéed mushrooms to elevate the savory profile of these delightful muffins.
With these variations, you’ll find endless ways to make these muffins special for your family and friends!
Expert Tips for Cottage Cheese Muffins
• Zucchini Preparation: Make sure to squeeze out excess moisture from the grated zucchini to prevent soggy muffins.
• Texture Control: For fluffier muffins, blend the cottage cheese and eggs until fully smooth; this helps create a light consistency.
• Flour Balance: Avoid using all-purpose flour instead of einkorn or almond flour, as it might alter the texture and flavor profile.
• Proper Scooping: Use a large cookie scoop to ensure even baking and uniform muffin sizes—this helps with consistent cooking times.
• Baking Check: Keep an eye on the muffins during the last few minutes of baking. If they’re browning too fast, cover loosely with foil.
These tips will elevate your Cottage Cheese Muffins and ensure your baking experience is a delicious success!
How to Store and Freeze Cottage Cheese Muffins
Room Temperature: Enjoy these muffins for up to 2 days stored in an airtight container at room temperature. They make a perfect quick snack!
Fridge: Keep your cottage cheese muffins fresh for up to 5 days by storing them in the fridge in a sealed container. Reheat in the microwave for a warm treat.
Freezer: For longer storage, freeze muffins in a single layer on a baking sheet, then transfer to a zip-top bag. They can last up to 3 months!
Reheating: When ready to enjoy, simply thaw in the fridge overnight, or microwave for 30-60 seconds until warmed through.
Cottage Cheese Muffins Recipe FAQs
How do I select ripe zucchini?
Choosing the perfect zucchini is essential for these muffins! Look for zucchinis that are firm, glossy, and free of dark spots. They should feel heavy for their size, indicating juiciness. Aim for zucchinis around 6 to 8 inches long, as they are typically the most flavorful and tender.
How should I store leftover cottage cheese muffins?
You can store your cottage cheese muffins in an airtight container at room temperature for up to 2 days. If you’d like them to last longer, placing them in the fridge will keep them fresh for about 5 days. Just pop them in the microwave for about 30 seconds to warm them up before serving!
Can I freeze cottage cheese muffins?
Absolutely! To freeze these delightful muffins, first, let them cool completely. Then, arrange them in a single layer on a baking sheet and place them in the freezer until solid. This prevents them from sticking together. Once frozen, transfer the muffins to a zip-top bag and label them with the date. They can be frozen for up to 3 months! When you’re ready to enjoy, thaw them in the fridge overnight or microwave them for 30-60 seconds until warmed through.
What if my muffins come out too dense?
If you find your cottage cheese muffins are denser than expected, it’s typically due to the dairy components. To remedy this, ensure you’re blending the cottage cheese and eggs thoroughly until smooth, as this air incorporation creates a lighter texture. Additionally, consider gently folding in the dry ingredients without overmixing, as too much stirring can lead to denser muffins.
Are there any dietary considerations for these muffins?
These cottage cheese muffins are versatile and can be tailored to suit dietary needs. If you or someone in your household has gluten sensitivities, you can use a gluten-free flour blend in place of the einkorn and almond flours. Additionally, please be cautious if any family members have dairy allergies, as both cottage cheese and the Mexican blend cheese contain dairy.
Can I add other ingredients to this recipe?
Certainly! These muffins are a fantastic base for various mix-ins. Considering adding chopped herbs like chives or spinach for added flavor, or even diced peppers for a bit of a kick. The more the merrier—just keep an eye on your overall moisture and texture balance!

Irresistibly Cheesy Cottage Cheese Muffins You’ll Love
Ingredients
Equipment
Method
- Preheat the oven to 350°F (176°C). Line 10 cups of a muffin tin with parchment paper liners.
- Shred the zucchini using a food processor with a grating attachment and set aside.
- Blend the cottage cheese and eggs in the food processor until smooth and creamy, about 30 seconds.
- Combine einkorn flour, almond flour, baking powder, and sea salt into the food processor and blend until smooth.
- Fold the batter into the bowl with zucchini. Add the shredded Mexican blend cheese and gently mix until well incorporated.
- Scoop the batter into the lined muffin cups using a large cookie scoop, filling them almost to the top.
- Bake the muffins for 25-30 minutes until golden brown and a toothpick inserted comes out clean.
- Cool the muffins in the pan for 5-10 minutes before removing.







